XIST loss impairs mammary stem cell differentiation and increases tumorigenicity through Mediator hyperactivation

Laia Richart 1Mary-Loup Picod-Chedotel 2Michel Wassef 1Manon Macario 2Setareh Aflaki 1Marion A Salvador 2Tiphaine Héry 1Aurélien Dauphin 1Julien Wicinski 2Véronique Chevrier 2Sonia Pastor 3Geoffrey Guittard 3Samuel Le Cam 1Hanya Kamhawi 2Rémy Castellano 4Géraldine Guasch 2Emmanuelle Charafe-Jauffret 5Edith Heard 6Raphaël Margueron 7Christophe Ginestier 8

Cell, 2022 May 13;S0092-8674(22)00532-3

Summary

X inactivation (XCI) is triggered by upregulation of XIST, which coats the chromosome in cis, promoting formation of a heterochromatic domain (Xi). XIST role beyond initiation of XCI is only beginning to be elucidated. Here, we demonstrate that XIST loss impairs differentiation of human mammary stem cells (MaSCs) and promotes emergence of highly tumorigenic and metastatic carcinomas. On the Xi, XIST deficiency triggers epigenetic changes and reactivation of genes overlapping Polycomb domains, including Mediator subunit MED14MED14 overdosage results in increased Mediator levels and hyperactivation of the MaSC enhancer landscape and transcriptional program, making differentiation less favorable. We further demonstrate that loss of XIST and Xi transcriptional instability is common among human breast tumors of poor prognosis. We conclude that XIST is a gatekeeper of human mammary epithelium homeostasis, thus unveiling a paradigm in the control of somatic cell identity with potential consequences for our understanding of gender-specific malignancies.